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Human disease related genes
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UMAP gene cluster
Pig tissue group category (RNA)
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Other congenital disorders
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Subclass
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Keyword
Chromosome
1
2
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5
6
7
8
9
10
11
12
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14
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MT
Unmapped
X
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External id
Variability
Variable
Not variable
Tissue
Any
Adipose tissue
Brain
Cartilage
Heart
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Large intestine
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Skin
Small intestine
Stomach 1
Upper respiratory system
Cluster
1 - Brain neurotransmission
2 - Brain neurotransmission
3 - Brain cellular structure
4 - Brain development
5 - Intracellular signalling
6 - Brain uncharacterized
7 - Retinal
8 - Neurohormonal
9 - Testis spermatogenesis
10 - Housekeeping transcription
11 - Testis uncharacterized
12 - Metabolic
13 - Testis sperm
14 - Low abundant uncharacterized
15 - Testis uncharacterized
16 - Aorta uncharacterized
17 - Cilium structure
18 - Low abundant uncharacterized
19 - Housekeeping mitochondrial
20 - Hormonal
21 - Low abundant uncharacterized
22 - Housekeeping transcription
23 - Cilium structure
24 - Low abundant uncharacterized
25 - Low abundant uncharacterized
26 - Low abundant uncharacterized
27 - Low abundant uncharacterized
28 - Housekeeping mitochondrial translation
29 - Male tissue bacterial defense
30 - Housekeeping structural
31 - Housekeeping uncharacterized
32 - Transport
33 - Lens
34 - Prostate uncharacterized
35 - Low abundant uncharacterized
36 - Receptors uncharacterized
37 - Olfactory bulb
38 - Lung and thyroid development
39 - Kidney transport
40 - Testis
41 - Low abundant uncharacterized
42 - Low abundant uncharacterized
43 - Breast uncharacterized
44 - Housekeeping
45 - Thymus uncharacterized
46 - Skeletal muscle contraction
47 - Spleen uncharacterized
48 - Low abundant uncharacterized
49 - Heart contraction
50 - Muscle contraction
51 - Liver and kidney
52 - Housekeeping
53 - Housekeeping mitochondrial
54 - Interferons
55 - Low abundant uncharacterized
56 - Low abundant uncharacterized
57 - Skin
58 - Immune cells
59 - Squamous epithelium
60 - Not detected
61 - Enzymes and secretion
62 - Squamous epithelium
63 - Small intestine
64 - Gastrointestinal
65 - Epithelium
66 - Housekeeping mRNA
67 - Gastrointestinal
68 - Housekeeping protein processing
69 - Housekeeping
70 - Housekeeping
71 - Housekeeping regulation
72 - Digestive and respiratory defense
73 - Housekeeping cell cycle
74 - Extracellular matrix
75 - Housekeeping
76 - Housekeeping regulation
77 - Housekeeping defense
78 - Lymphoid T cells
79 - Lymphoid myeloid
80 - Heart uncharacterized
81 - Vasculature and connective tissue
82 - Lymphoid B cell
83 - Not detected
84 - Epithelium transcription regulation
Tissue group
Any
Adipose tissue
Adrenal gland
Aorta
Bone marrow
Brain
Breast
Cartilage
Cervix
Choroid plexus
Cornea
Ductus deferens
Dura mater
Endometrium
Epididymis
Esophagus
Fallopian tube
Gallbladder
Heart
Kidney
Large intestine
Lens
Liver
Lung
Lymphoid tissue
Male glands
Mesothelial tissue
Mouth
Ovary
Penis
Pineal gland
Pituitary gland
Retina
Salivary gland
Skeletal muscle
Skin
Small intestine
Smooth muscle
Stomach
Synovial tissue
Testis
Thyroid gland
Upper respiratory system
Urinary bladder
Vagus nerve
Category
Tissue enriched
Group enriched
Tissue enhanced
Low tissue specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Brain region
Any
Amygdala
Basal ganglia
Cerebellum
Cerebral cortex
Corpus callosum
Hippocampal formation
Hypothalamus
Midbrain
Olfactory region
Pituitary gland
Pons and medulla
Retina
Spinal cord
Thalamus
Category
Region enriched
Group enriched
Region enhanced
Low region specificity
Not detected
Detected in all
Detected in many
Detected in some
Detected in single
Is highest expressed
Column
Gene
Position
Tissue specific score
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2003 GENES FOUND
Gene
Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
UMAP cluster
Within tissue variation
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Select data columns:
Gene
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Gene
i
Gene name, if available.
Gene synonym (Human ortholog)
Ensembl gene id
Ensembl gene id (Proteincoding human ortholog)
Gene description
Uniprot accession (Human ortholog)
Chromosome
Chromosome position
Related human disease
RNA category pig
Expand
RNA pig tissue group specificity
RNA pig tissue group distribution
RNA pig tissue group specificity score
RNA pig tissue group specific NX
RNA pig brain regional specificity
RNA pig brain regional distribution
RNA pig brain regional specificity score
RNA pig brain regional specific pTPM
Annotation
Expand
UMAP cluster
Within tissue variation
Pig Tissue RNA
Expand
Abdominal adipose tissue [NX]
Adrenal gland [NX]
Amygdala [NX]
Aorta [NX]
Bone marrow [NX]
Breast [NX]
Bronchus [NX]
Bulbourethral gland [NX]
Caudate [NX]
Cecum [NX]
Cerebellum [NX]
Cervix [NX]
Choroid plexus [NX]
Cingulate cortex [NX]
Colon [NX]
Cornea [NX]
Corpus callosum [NX]
Dorsal hippocampus [NX]
Dorsal spinal cord [NX]
Ductus deferens [NX]
Duodenum [NX]
Dura mater [NX]
Ear cartilage [NX]
Endometrium 1 [NX]
Entorhinal cortex [NX]
Epididymis [NX]
Esophagus [NX]
Facial adipose tissue [NX]
Fallopian tube [NX]
Gallbladder [NX]
Heart atrium [NX]
Heart valve [NX]
Heart wall [NX]
Hypothalamus [NX]
Ileum [NX]
Insular cortex [NX]
Jejunum [NX]
Joint cartilage [NX]
Kidney (cortex) [NX]
Kidney (medulla) [NX]
Larynx [NX]
Lens [NX]
Lip [NX]
Liver [NX]
Lung [NX]
Lymph node [NX]
Medulla [NX]
Midbrain [NX]
Motor cortex [NX]
Nasopharynx epithelium [NX]
Occipital cortex [NX]
Olfactory bulb [NX]
Olfactory epithelium [NX]
Oral mucosa [NX]
Ovary [NX]
Penis [NX]
Periaqueductal gray [NX]
Peritoneum [NX]
Pineal gland [NX]
Pituitary gland [NX]
Pleura [NX]
Pons [NX]
Prefrontal cortex [NX]
Prostate [NX]
Putamen [NX]
Rectum [NX]
Retina [NX]
Retrosplenial cortex [NX]
Salivary gland [NX]
Seminal vesicle [NX]
Septum [NX]
Skeletal muscle [NX]
Skin (back) [NX]
Skin (groin) [NX]
Smooth muscle (intestine) [NX]
Somatosensory cortex [NX]
Spleen [NX]
Stomach (lower) [NX]
Stomach (upper) [NX]
Subcutaneous adipose tissue [NX]
Subiculum [NX]
Substantia nigra [NX]
Superior colliculi [NX]
Synovial tissue [NX]
Temporal cortex [NX]
Testis [NX]
Thalamus [NX]
Thymus [NX]
Thyroid gland [NX]
Tongue [NX]
Tonsil [NX]
Trachea [NX]
Urethral gland [NX]
Urinary bladder [NX]
Vagus nerve [NX]
Ventral hippocampus [NX]
Ventral pallidum [NX]
Ventral spinal cord [NX]
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Gene
i
Gene name, if available.
Ensembl
x
Human ortholog
x
Gene description
x
RNA pig tissue group specificity
x
RNA pig tissue group distribution
x
RNA pig tissue group specific NX
x
AAGAB
ENSSSCG00000004951
ENSG00000103591
Alpha and gamma adaptin binding protein
Low tissue specificity
Detected in all
AASDHPPT
ENSSSCG00000014998
ENSG00000149313
Aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
Low tissue specificity
Detected in all
ABCB7
ENSSSCG00000012424
ENSG00000131269
ATP binding cassette subfamily B member 7
Low tissue specificity
Detected in all
ABCD3
ENSSSCG00000028620
ENSG00000117528
ATP-binding cassette sub-family D member 3
Low tissue specificity
Detected in all
ABCE1
ENSSSCG00000009043
ENSG00000164163
ATP binding cassette subfamily E member 1
Low tissue specificity
Detected in all
ABHD11
ENSSSCG00000007715
ENSG00000106077
Abhydrolase domain containing 11
Low tissue specificity
Detected in all
ABHD17B
ENSSSCG00000021802
ENSG00000107362
Protein ABHD17B
Tissue enhanced
Detected in all
brain:
36.4
ABHD5
ENSSSCG00000011297
ENSG00000011198
1-acylglycerol-3-phosphate O-acyltransferase ABHD5
Low tissue specificity
Detected in all
ABHD6
ENSSSCG00000011470
ENSG00000163686
Abhydrolase domain containing 6
Tissue enhanced
Detected in many
choroid plexus:
34.9
pineal gland:
33.7
ABI1
ENSSSCG00000024127
ENSG00000136754
Abl interactor 1
Low tissue specificity
Detected in all
ACAP2
ENSSSCG00000031147
ENSG00000114331
ArfGAP with coiled-coil, ankyrin repeat and PH domains 2
Low tissue specificity
Detected in all
ACBD5
ENSSSCG00000011064
ENSG00000107897
Acyl-CoA binding domain containing 5
Low tissue specificity
Detected in all
ACOT4
ENSSSCG00000002349
ENSG00000177465
Acyl-CoA thioesterase 4
Low tissue specificity
Detected in all
ACP1
ENSSSCG00000008659
ENSG00000143727
Low molecular weight phosphotyrosine protein phosphatase
Low tissue specificity
Detected in all
ACSL3
ENSSSCG00000016223
ENSG00000123983
Long-chain-fatty-acid--CoA ligase 3
Tissue enriched
Detected in all
male glands:
126.7
ACTG1
ENSSSCG00000028355
ENSG00000184009
Actin gamma 1
Low tissue specificity
Detected in all
ACTL6A
ENSSSCG00000011762
ENSG00000136518
Actin like 6A
Low tissue specificity
Detected in all
ACTR10
ENSSSCG00000022299
ENSG00000131966
Actin related protein 10 homolog
Tissue enhanced
Detected in all
male glands:
84.2
ACTR2
ENSSSCG00000008358
ENSG00000138071
Actin-related protein 2
Low tissue specificity
Detected in all
ACTR3
ENSSSCG00000015710
ENSG00000115091
Actin-related protein 3
Low tissue specificity
Detected in all
ACTR6
ENSSSCG00000025682
ENSG00000075089
ARP6 actin related protein 6 homolog
Low tissue specificity
Detected in all
ADAM10
ENSSSCG00000004595
ENSG00000137845
Disintegrin and metalloproteinase domain-containing protein 10 precursor
Low tissue specificity
Detected in all
ADH5
ENSSSCG00000009185
ENSG00000197894
Alcohol dehydrogenase class-3
Low tissue specificity
Detected in all
ADK
ENSSSCG00000010315
ENSG00000156110
Adenosine kinase
Tissue enhanced
Detected in all
liver:
37.5
ADNP2
ENSSSCG00000038632
ENSG00000101544
ADNP homeobox 2
Low tissue specificity
Detected in all
ADO
ENSSSCG00000031360
ENSG00000181915
2-aminoethanethiol dioxygenase
Low tissue specificity
Detected in all
AGFG1
ENSSSCG00000016248
ENSG00000173744
ArfGAP with FG repeats 1
Tissue enhanced
Detected in all
lens:
77.8
AGK
ENSSSCG00000016492
ENSG00000006530
Acylglycerol kinase, mitochondrial
Low tissue specificity
Detected in all
AGO3
ENSSSCG00000003630
ENSG00000126070
Protein argonaute-3
Low tissue specificity
Detected in all
AGPAT5
ENSSSCG00000015755
ENSG00000155189
1-acyl-sn-glycerol-3-phosphate acyltransferase epsilon
Low tissue specificity
Detected in all
AGPS
ENSSSCG00000023983
ENSG00000018510
Alkylglycerone phosphate synthase
Low tissue specificity
Detected in all
AHCYL1
ENSSSCG00000006816
ENSG00000168710
Adenosylhomocysteinase 2
Low tissue specificity
Detected in all
AHSA1
ENSSSCG00000002406
ENSG00000100591
Activator of HSP90 ATPase activity 1
Low tissue specificity
Detected in all
AIG1
ENSSSCG00000004136
ENSG00000146416
Androgen induced 1
Low tissue specificity
Detected in all
AIMP1
ENSSSCG00000024168
ENSG00000164022
Aminoacyl tRNA synthase complex-interacting multifunctional protein 1
Low tissue specificity
Detected in all
AKIRIN2
ENSSSCG00000004307
ENSG00000135334
Akirin-2
Low tissue specificity
Detected in all
AKTIP
ENSSSCG00000026181
ENSG00000166971
AKT-interacting protein
Low tissue specificity
Detected in all
ALG2
ENSSSCG00000005383
ENSG00000119523
Alpha-1,3/1,6-mannosyltransferase ALG2
Tissue enriched
Detected in all
male glands:
68.2
ALG6
ENSSSCG00000003815
ENSG00000088035
ALG6, alpha-1,3-glucosyltransferase
Low tissue specificity
Detected in all
ALG8
ENSSSCG00000014887
ENSG00000159063
ALG8, alpha-1,3-glucosyltransferase
Low tissue specificity
Detected in all
ALKBH8
ENSSSCG00000024628
ENSG00000137760
AlkB homolog 8, tRNA methyltransferase
Low tissue specificity
Detected in all
AMD1
ENSSSCG00000004392
ENSG00000123505
Adenosylmethionine decarboxylase 1
Low tissue specificity
Detected in all
AMN1
ENSSSCG00000034407
ENSG00000151743
Antagonist of mitotic exit network 1 homolog
Low tissue specificity
Detected in all
ANAPC10
ENSSSCG00000033871
ENSG00000164162
Anaphase-promoting complex subunit 10
Low tissue specificity
Detected in all
ANAPC13
ENSSSCG00000033057
ENSG00000129055
Anaphase-promoting complex subunit 13
Tissue enhanced
Detected in all
lens:
87.0
ANAPC16
ENSSSCG00000037728
ENSG00000166295
Anaphase-promoting complex subunit 16
Low tissue specificity
Detected in all
ANAPC5
ENSSSCG00000009814
ENSG00000089053
Anaphase promoting complex subunit 5
Low tissue specificity
Detected in all
ANAPC7
ENSSSCG00000030222
ENSG00000196510
Anaphase promoting complex subunit 7
Low tissue specificity
Detected in all
ANKIB1
ENSSSCG00000015314
ENSG00000001629
Ankyrin repeat and IBR domain containing 1
Low tissue specificity
Detected in all
ANKMY2
ENSSSCG00000015360
ENSG00000106524
Ankyrin repeat and MYND domain-containing protein 2
Low tissue specificity
Detected in all
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